Some of you have asked in the last week why we need to be vaccinated against the flu virus annually. There is a wonderful animation at CNN.com that shows why--the flu virus engages in this really amazing process known as antigen shifting.
Essentially, antigen shifting is a lot like a performer making multiple costume changes during a show--one minute the performer might be wearing a showy, sequined bodysuit; the next, a striped, flowing ball gown. The performer is still the same, but the outside clothing is different so it's a little tougher to identify who the performer is. Antigen shifting occurs abruptly as different regions of the viral genome are expressed, causing surface antigens that are produced to be from two different strains of the same virus. This is why we must be vaccinated annually against flu, in particular, as it engages in antigen shifting on a fairly regular basis. Antigen shift is not to be confused with antigenic drift, which happens over a longer period of time.
Now, viruses aren't the only pathogen that perform antigen shifting--the parasite that causes malaria does this as well. For about 10 years now, it has been known that antigen shifting in Plasmodium (the protist that causes malaria) occurs, and that this is the reason why developing a vaccine is so difficult.
So how is this possible that a non-living entity such as a virus can perform such a clever hiding act? Obviously, antigen shifting happens in living organisms as demonstrated by Plasmodium. So why is it possible that this process can happen in a nonliving thing? Could antigen shifting (and thus, genomic shuffling) have developed as a means by which survival of certain genomic elements evolved? Could the ability to shuffle one's genome insure survival of a species in an environment that does not favor genomic stability? Furthermore, since viruses have this ability, were viruses around long before living cells were? It certainly raises some interesting questions about the origins of life and genomes, doesn't it?
Posted by scienceguru on February 10, 2008
Tags discuss, disease, genomics is a cool branch of biology, proteins are cool, viruses, what do you think?


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